Vent Ecology Working Group's High Throughput List

The InterRidge Vent Ecology Working Group would like to encourage interactions between researchers with common interests in high-throughput genomic approaches for the study of deep-sea hydrothermal vent organisms. Please feel free to submit your high-throughput listing here: http://www.interridge.org/node/add/highthroughput
Please contact the InterRidge Coordinator (coordinator@interridge.org) with any questions.

Species Type of project Approach Project complete? Posted in databases? Contact person(s) Lab(s) / Consortia
Alvinella pompejana ESTs Sanger sequencing Yes Yes Craig Cary Univ. Delaware (USA)
Alvinella pompejana ESTs Sanger sequencing Underway No Didier Jollivet Alvinella consortium (France)
Bathymodiolus azoricus ESTs Sanger sequencing Yes Arnaud Tanguy Genetics of adaptions to extreme environments (Roscoff, France)
Bathymodiolus azoricus symbionts Metagenome 454 Titanium Underway No Nicole Dubilier Adaptation in extreme environment (Univ. Paris 6, France); MPI Bremen
Branchipolynoe seepensis ESTs Sanger sequencing Yes No Stephane Hourdez Genetics of adaptions to extreme environments (Roscoff, France)
Paralvinella grasslei ESTs Sanger sequencing Yes No Didier Jollivet Genetics of adaptions to extreme environments (Roscoff, France)
Paralvinella palmiformis ESTs 454 Titanium Proposed N/A Stephane Hourdez Genetics of adaptions to extreme environments (Roscoff, France)
Bathymodiolus azoricus (gill tissues) ESTs 454 Titanium Yes NA Raul Bettencourt IMAR Institute, University of the Azores
Bacteria Metagenome Other Yes Yes, accession no. AB290214–AB290259. Akihiko Maruyama National Institute of Advanced Industrial Science and Technology (AIST), Japan
Rimicaris exoculata symbionts Genomes Underway No M.A. Cambon-Bonavita EU MAMBA LMEE France
Branchinotogluma segonzaci ESTs 454 Titanium Underway No Stephane Hourdez hourdez@sb-roscofff.fr Genetics of Adaptation to Extreme Environment, Roscoff
Branchinotogluma trifurcus ESTs 454 Titanium Underway Not yet Stephane Hourdez hourdez@sb-roscofff.fr Genetics of Adaptation to Extreme Environment, Roscoff
Branchinotogluma sp. ESTs 454 Titanium Not yet Stephane Hourdez hourdez@sb-roscofff.fr Genetics of Adaptation to Extreme Environment, Roscoff
Harmothoe sp. ESTs 454 Titanium Underway Not yet Stephane Hourdez hourdez@sb-roscofff.fr Genetics of Adaptation to Extreme Environment, Roscoff
Paralvinella fijiensis ESTs Other Underway Not yet Arnaud Tanguy atanguy@sb-roscoff.fr genetics of Adaptation to Extreme Environment, Roscoff
Paralvinella grasslei ESTs Other Underway Not yet Arnaud Tanguy atanguy@sb-roscoff.fr Genetics of Adaptation to Extreme Environment, Roscoff
Alvinella caudata ESTs Other Underway Not yet Arnaud Tanguy atanguy@sb-roscoff.fr Genetics of Adaptation to Extreme Environment, Roscoff
Lepidonotopodium williamsae ESTs Other Yes Not yet Stephane Hourdez hourdez@sb-roscofff.fr Station Biologique de Roscoff
Levensteiniella plicata ESTs Other Yes Not yet Stephane Hourdez hourdez@sb-roscofff.fr Station Biologique de Roscoff
Lepidonotopodium fimbriatum ESTs Other Yes Not yet Stephane Hourdez hourdez@sb-roscofff.fr Genetics of Adaptation to Extreme Environment, Roscoff
Paralvinella unidentata ESTs Other Yes Not yet Didier Jollivet Genetics of Adaptation to Extreme Environment, Roscoff
Paralvinella hessleri ESTs Other Yes Not yet Didier Jollivet Genetics of Adaptation to Extreme Environment, Roscoff
Paralvinella pandorae ESTs Other Yes Not yet Didier Jollivet Genetics of Adaptation to Extreme Environment, Roscoff